# SBPAX representation of EGFR autophoshorylation (simplified)
# http://www.reactome.org/cgi-bin/eventbrowser?ID=177934

# One-to-one correspondence with the BioPAX file

#Stoichiometries

ex:oneMolecule   rdf:type   sbpax:Stoichiometry
ex:oneMolecule   sbpax:hasUnit   sbpax:particleNumber
ex:oneMolecule   sbpax:hasNumber   1.0

ex:tenMolecules   rdf:type   sbpax:Stoichiometry
ex:tenMolecules   sbpax:hasUnit   sbpax:particleNumber
ex:tenMolecules   sbpax:hasNumber   10.0

#Locations

ex:plasmaMembrane   rdf:type   sbpax:Location
ex:plasmaMembrane   sbpax:hasDimensions   2
ex:cytosol   rdf:type   sbpax:Location
ex:cytosol   sbpax:hasDimensions   3
ex:cytosol   sbpax:surroundedBy   ex:plasmaMembrane

#Substances

ex:ADP   rdf:type   bp:smallMolecule
ex:ATP   rdf:type   bp:smallMolecule
ex:EGF-EGFR-generic   rdf:type   bp:complex
ex:EGF-EGFR   rdf:type   bp:complex
ex:EGF-phosphoEGFR   rdf:type   bp:complex

ex:EGF-EGFR   sbpax:subSetOf   ex:EGF-EGFR-generic
ex:EGF-phosphoEGFR   sbpax:subSetOf   ex:EGF-EGFR-generic

#Species

ex:ADPInCytosol   rdf:type   sbpax:Species
ex:ADPInCytosol   sbpax:consistsOf   sbpax:ADP
ex:ADPInCytosol   sbpax:locatedAt   sbpax:Cytosol

ex:ATPInCytosol   rdf:type   sbpax:Species
ex:ATPInCytosol   sbpax:consistsOf   sbpax:ATP
ex:ATPInCytosol   sbpax:locatedAt   sbpax:Cytosol

ex:EGF-EGFRInMembrane   rdf:type   sbpax:Species
ex:EGF-EGFRInMembrane   sbpax:consistsOf   ex:EGF-EGFR
ex:EGF-EGFRInMembrane   sbpax:locatedAt   sbpax:plasmaMembrane

ex:EGF-phosphoEGFRInMembrane   rdf:type   sbpax:Species
ex:EGF-phosphoEGFRInMembrane   sbpax:consistsOf   ex:EGF-phosphoEGFR
ex:EGF-phosphoEGFRInMembrane   sbpax:locatedAt   sbpax:plasmaMembrane

#The Process

ex:autophosphorylationOfEGFR   rdf:type   bp:biochemicalReaction

ex:autophosphorylationOfEGFR   sbpax:hasParticipantLeft   ex:PPLATP
ex:PPLATP   rdf:type   sbpax:ProcessParticipantLeft
ex:PPLATP   sbpax:hasStoichiometry   ex:tenMolecules
ex:PPLATP   sbpax:involves   ex:ATPInCytosol

ex:autophosphorylationOfEGFR   sbpax:hasParticipantLeft   ex:PPLEE
ex:PPLEE   rdf:type   sbpax:ProcessParticipantLeft
ex:PPLEE   sbpax:hasStoichiometry   ex:oneMolecule
ex:PPLEE   sbpax:involves   ex:EGF-EGFRInMembrane

ex:autophosphorylationOfEGFR   sbpax:hasParticipantRight   ex:PPRADP
ex:PPRADP   rdf:type   sbpax:ProcessParticipantLeft
ex:PPRADP   sbpax:hasStoichiometry   ex:tenMolecules
ex:PPRADP   sbpax:involves   ex:ADPInCytosol

ex:autophosphorylationOfEGFR   sbpax:hasParticipantRight   ex:PPREPE
ex:PPREPE   rdf:type   sbpax:ProcessParticipantLeft
ex:PPREPE   sbpax:hasStoichiometry   ex:oneMolecule
ex:PPREPE   sbpax:involves   ex:EGF-phosphoEGFRInMembrane

ex:autophosphorylationOfEGFR   sbpax:hasParticipantCatalyst   ex:PPCEE
ex:PPCEE   rdf:type   sbpax:ProcessParticipantCatalyst
ex:PPCEE   sbpax:hasStoichiometry   ex:oneMolecule
ex:PPCEE   sbpax:involves   ex:EGF-EGFRInMembrane

#The Model

ex:model1   rdf:type   sbpax:SystemModel
ex:model1   sbpax:hasProcessModel   ex:modelOfAutophosphorylation
ex:modelOfAutophosphorylation   rdf:type   sbpax:ProcessModel
ex:modelOfAutophosphorylation   sbpax:modelsProcess
ex:autophosphorylationOfEGFR
ex:model1   sbpax:modelsSpecies   ex:ATPInCytosol
ex:model1   sbpax:modelsSpecies   ex:ADPInCytosol
ex:model1   sbpax:modelsSpecies   ex:EGF-EGFRInMembrane
ex:model1   sbpax:modelsSpecies   ex:EGF-phosphoEGFRInMembrane
ex:model1   sbpax:modelsSubstance   ex:ATP
ex:model1   sbpax:modelsSubstance   ex:ADP
ex:model1   sbpax:modelsSubstance   ex:EGF-EGFR
ex:model1   sbpax:modelsSubstance   ex:EGF-phosphoEGFR