Name: “Brown et al 2008 PIP2 Diffusion 1D and 3D”
Saved: Mon, 14 Apr 2008  17:01:46 GMT
vcell identifier: biomodel-27192717
Owned by: “Brown”

download model (.vcml)

Compartments, Species, Reactions
  • Compartment "Extraclellular".   (type: Volume)
  • Compartment "Cytosol".   (type: Volume)
    • Species "IP3s_Cyt"
    • Species "IP3d_Cyt"
    • Reaction "IP3_d"   (IP3d_Cyt → ∅)
    • Reaction "IP3sdeg"   (IP3s_Cyt → ∅)
    • Reaction "IP3_s"   (IP3s_Cyt → ∅)
    • Reaction "IP3ddeg"   (IP3d_Cyt → ∅)
  • Compartment "ER".   (type: Volume)
  • Compartment "ERM".   (type: Membrane)
  • Compartment "PM".   (type: Membrane)
    • Species "DAGs_PM"
    • Species "PLC_PM"
    • Species "PIs_PM"
    • Species "PLC_act_PM"
    • Species "PIP2Sink_PM"
    • Species "PIP2_bound_PM"
    • Species "stim_PM"
    • Species "PIP2d_PM"
    • Species "PIP2s_PM"
    • Species "PId_PM"
    • Species "PIPd_PM"
    • Species "PIPs_PM"
    • Species "DAGd_PM"
    • Reaction "PIPSyn"   (PIs_PM → PIPs_PM)
    • Reaction "DAG_d"   (DAGd_PM → ∅)
    • Reaction "DAGdeg"   (DAGd_PM → ∅)
    • Reaction "PI_d"   (PId_PM → ∅)
    • Reaction "PIP_d"   (PIPd_PM → ∅)
    • Reaction "PIPdeg"   (PIPd_PM → ∅)
    • Reaction "PI_s"   (PIs_PM → ∅)
    • Reaction "PIP_s"   (PIPs_PM → ∅)
    • Reaction "PIdeg"   (PId_PM → ∅)
    • Reaction "DAG_s"   (DAGs_PM → ∅)
    • Reaction "PIP2_hyd"   (PIP2s_PM → DAGs_PM + IP3s_Cyt)
    • Reaction "PIP2Syn"   (PIPs_PM → PIP2s_PM)
    • Reaction "PLCact"   (PLC_PM → PLC_act_PM)
    • Reaction "PIP2_s"   (PIP2s_PM → ∅)
    • Reaction "PIP2_d"   (PIP2d_PM → ∅)
    • Reaction "PIP2deg"   (PIP2d_PM → ∅)
    • Reaction "PIP2Binding"   (PIP2s_PM + PIP2Sink_PM → PIP2_bound_PM)
    • Reaction "PIP2_hyd1"   (PIP2_bound_PM → DAGs_PM + IP3s_Cyt + PIP2Sink_PM)
2018-07-12T19:23:16+00:00 February 16th, 2018|biomodel|