Name: “neves_cell_2008”
Saved: Wed, 13 Aug 2008  18:04:17 GMT
vcell identifier: biomodel-28625786
Owned by: “susana”

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Compartments, Species, Reactions
  • Compartment "cyto".   (type: Volume)
    • Species "G_GDP_cyto"
    • Species "G_protein_cyto"
    • Species "G_a_s_cyto"
    • Species "GRK_bg_cyto"
    • Species "PDE4_cyto"
    • Species "ATP_cyto"
    • Species "R2C2_cyto"
    • Species "PP_PDE_cyto"
    • Species "MAPK_active_cyto"
    • Species "MEK_cyto"
    • Species "MEK_active_cyto"
    • Species "B_Raf_active_cyto"
    • Species "bg_cyto"
    • Species "B_Raf_cyto"
    • Species "PKA_cyto"
    • Species "AMP_cyto"
    • Species "GRK_cyto"
    • Species "PP2A_cyto"
    • Species "MAPK_cyto"
    • Species "PTP_cyto"
    • Species "PTP_PKA_cyto"
    • Species "c_R2C2_cyto"
    • Species "c2_R2C2_cyto"
    • Species "c3_R2C2_cyto"
    • Species "PDE_high_km_cyto"
    • Species "cAMP_cyto"
    • Species "PTP_PP_cyto"
    • Species "PDE4_P_cyto"
    • Reaction "pde4_p"   (cAMP_cyto → AMP_cyto)
    • Reaction "PPase_Raf"   (B_Raf_active_cyto → B_Raf_cyto)
    • Reaction "PDE4"   (cAMP_cyto → AMP_cyto)
    • Reaction "bg_binds_GRK"   (GRK_cyto + bg_cyto → GRK_bg_cyto)
    • Reaction "MEK_activates_MAPK"   (MAPK_cyto → MAPK_active_cyto)
    • Reaction "PKA_activates_Raf"   (B_Raf_cyto → B_Raf_active_cyto)
    • Reaction "GTPase"   (G_a_s_cyto → G_GDP_cyto)
    • Reaction "trimer"   (bg_cyto + G_GDP_cyto → G_protein_cyto)
    • Reaction "A2"   (c3_R2C2_cyto + cAMP_cyto → PKA_cyto)
    • Reaction "highKM_PDE"   (cAMP_cyto → AMP_cyto)
    • Reaction "PKA_P_PTP"   (PTP_cyto → PTP_PKA_cyto)
    • Reaction "B1"   (R2C2_cyto + cAMP_cyto → c_R2C2_cyto)
    • Reaction "PKA_P_PDE"   (PDE4_cyto → PDE4_P_cyto)
    • Reaction "Raf_activates_MEK"   (MEK_cyto → MEK_active_cyto)
    • Reaction "PTP_PKA"   (MAPK_active_cyto → MAPK_cyto)
    • Reaction "B2"   (c_R2C2_cyto + cAMP_cyto → c2_R2C2_cyto)
    • Reaction "PTP"   (MAPK_active_cyto → MAPK_cyto)
    • Reaction "PPase_MAPK"   (MAPK_active_cyto → MAPK_cyto)
    • Reaction "pp2a_4"   (PDE4_P_cyto → PDE4_cyto)
    • Reaction "pp_ptp"   (PTP_PKA_cyto → PTP_cyto)
    • Reaction "PPase_mek"   (MEK_active_cyto → MEK_cyto)
    • Reaction "A1"   (c2_R2C2_cyto + cAMP_cyto → c3_R2C2_cyto)
  • Compartment "extra".   (type: Volume)
    • Species "iso_extra"
  • Compartment "cyto_mem".   (type: Membrane)
    • Species "AC_active_cyto_mem"
    • Species "iso_BAR_p_cyto_mem"
    • Species "AC_PKA_cyto_mem"
    • Species "BAR_cyto_mem"
    • Species "BAR_G_cyto_mem"
    • Species "iso_BAR_cyto_mem"
    • Species "AC_cyto_mem"
    • Species "iso_BAR_G_cyto_mem"
    • Reaction "activate_Gs"   (iso_BAR_G_cyto_mem → iso_BAR_cyto_mem + bg_cyto + G_a_s_cyto)
    • Reaction "iso_binds_BAR"   (BAR_cyto_mem + iso_extra → iso_BAR_cyto_mem)
    • Reaction "AC_active"   (ATP_cyto → cAMP_cyto)
    • Reaction "G_binds_iso_BAR"   (iso_BAR_cyto_mem + G_protein_cyto → iso_BAR_G_cyto_mem)
    • Reaction "AC_activation"   (G_a_s_cyto + AC_cyto_mem → AC_active_cyto_mem)
    • Reaction "AC_basal"   (ATP_cyto → cAMP_cyto)
    • Reaction "GRK"   (iso_BAR_cyto_mem → iso_BAR_p_cyto_mem)
    • Reaction "iso_binds_BAR_g"   (iso_extra + BAR_G_cyto_mem → iso_BAR_G_cyto_mem)
    • Reaction "GRK_bg"   (iso_BAR_cyto_mem → iso_BAR_p_cyto_mem)
    • Reaction "G_binds_BAR"   (BAR_cyto_mem + G_protein_cyto → BAR_G_cyto_mem)
2018-07-12T19:23:15+00:00 February 16th, 2018|biomodel|