Name: “hillelab: JungSR_PAR2_desensitization2015”
Saved: Mon, 13 Jun 2016 19:24:34 GMT
vcell identifier: biomodel-100961371
Owned by: “jsr007”
- Compartment "EX". (type: Volume)
- Species "AP_EX"
- Species "K_EX"
- Species "IP3_pipette"
- Species "AP_conc_EX"
- Reaction "Oxo_appl" (AP_conc_EX → AP_EX)
- Compartment "C". (type: Volume)
- Species "dynamin"
- Species "C1_dom_C"
- Species "IP3_C"
- Species "Ca_Fura4F_C"
- Species "K_C"
- Species "Fura4F_C"
- Species "Arrestin2"
- Species "IP3_LibraVIII_C"
- Species "IP3_PH_YFP_C"
- Species "LibraVIII_C"
- Species "Palk_C1"
- Species "PH_YFP_C"
- Species "PKC_cyto"
- Species "Palk_C2"
- Species "Ca_C"
- Species "Palk_O4"
- Species "Palk_C3"
- Species "Arrestin1"
- Reaction "PH_YFP_IP3" (IP3_C + PH_YFP_C → IP3_PH_YFP_C)
- Reaction "r12" (Palk_C1 → Palk_C2)
- Reaction "r24" (Palk_C2 → Palk_O4)
- Reaction "IP3deg_Palk" (IP3_C → ∅)
- Reaction "IP3_LibraVIII" (LibraVIII_C + IP3_C → IP3_LibraVIII_C)
- Reaction "IP3Pase_FDH" (IP3_C → ∅)
- Reaction "r23" (Palk_C2 → Palk_C3)
- Reaction "Cabind_Fura4F" (Fura4F_C + Ca_C → Ca_Fura4F_C)
- Compartment "Ca_store". (type: Volume)
- Species "Ca_Ca_store"
- Compartment "M". (type: Membrane)
- Species "RLPAC_M"
- Species "endocytosis"
- Species "PI_M"
- Species "KCNQ_M"
- Species "G_GDP_M"
- Species "PH_YFP_PIP2_M"
- Species "RLPA2_M"
- Species "PA_2AG_M"
- Species "RLGbeta_M"
- Species "KCNQ_PIP2_M"
- Species "PLC_M"
- Species "GaGTP_M"
- Species "GaGDP_PLC_M"
- Species "RLP_M"
- Species "Gbeta_M"
- Species "RGbeta_M"
- Species "R_M"
- Species "Ga_GDP_M"
- Species "RG_GDP_M"
- Species "PIP2_M"
- Species "boundPIP2_M"
- Species "DAG_M"
- Species "RL_M"
- Species "GaGTP_PLC_M"
- Species "RLG_GDP_M"
- Species "PKC_DAG_M"
- Species "RP_M"
- Species "C1_DAG_M"
- Species "PI4P_M"
- Species "RLPA1"
- Reaction "PIP5K_5Pase" (PI4P_M → PIP2_M)
- Reaction "PH_YFP_PIP2" (PH_YFP_C + PIP2_M → PH_YFP_PIP2_M)
- Reaction "NE_RLG" (RLG_GDP_M → RLGbeta_M + GaGTP_M)
- Reaction "reaction 1 for phosphorylation of ligand bound receptor" (RL_M → RLP_M)
- Reaction "reconstitution" (Gbeta_M + Ga_GDP_M → G_GDP_M)
- Reaction "G2" (RL_M + G_GDP_M → RLG_GDP_M)
- Reaction "DAGPase" (DAG_M → PA_2AG_M)
- Reaction "GTPase_Ga" (GaGTP_M → Ga_GDP_M)
- Reaction "PLCassoc" (PLC_M + GaGTP_M → GaGTP_PLC_M)
- Reaction "L2" (RG_GDP_M + AP_EX → RLG_GDP_M)
- Reaction "clathrin formation rate" (dynamin + RLPA2_M → RLPAC_M)
- Reaction "L1" (R_M + AP_EX → RL_M)
- Reaction "PLC_on_PI4P" (PI4P_M → DAG_M)
- Reaction "reaction 2 for phosphorylation of receptor" (R_M → RP_M)
- Reaction "NE_G" (G_GDP_M → GaGTP_M + Gbeta_M)
- Reaction "ligand2" (RP_M + AP_EX → RLP_M)
- Reaction "PI4K_4Pase" (PI_M → PI4P_M)
- Reaction "IP3_dialysis" (IP3_pipette → IP3_C)
- Reaction "VSP" (PIP2_M → PI4P_M)
- Reaction "G1beta" (Gbeta_M + R_M → RGbeta_M)
- Reaction "NE_GaP" (GaGDP_PLC_M → GaGTP_PLC_M)
- Reaction "arrestin binding" (RLP_M + Arrestin2 → RLPA2_M)
- Reaction "PIP2bindKCNQ" (KCNQ_M + PIP2_M → KCNQ_PIP2_M)
- Reaction "pinching" (RLPAC_M + dynamin → endocytosis)
- Reaction "G2beta" (Gbeta_M + RL_M → RLGbeta_M)
- Reaction "PIP2hydr" (PIP2_M → IP3_C + DAG_M)
- Reaction "PLCdiss" (GaGDP_PLC_M → Ga_GDP_M + PLC_M)
- Reaction "G1" (R_M + G_GDP_M → RG_GDP_M)
- Reaction "GTPase_GaP" (GaGTP_PLC_M → GaGDP_PLC_M)
- Reaction "PKC_DAG binding" (DAG_M + PKC_cyto → PKC_DAG_M)
- Reaction "C1bindDAG" (C1_dom_C + DAG_M → C1_DAG_M)
- Reaction "PIP2_buffering" (PIP2_M → boundPIP2_M)
- Reaction "NE_RG" (RG_GDP_M → GaGTP_M + RGbeta_M)
- Reaction "L2beta" (RGbeta_M + AP_EX → RLGbeta_M)
- Reaction "Arrestin 1" (RLP_M + Arrestin1 → RLPA1)
- Reaction "RLPA1 to clathrin" (RLPA1 → RLPAC_M)
- Reaction "KCNQ2/3" (K_EX → K_C)
- Compartment "ERM". (type: Membrane)
- Species "noninactiveIP3R"
- Species "inactiveIP3R"
- Reaction "h_reaction_IP3Rinactivation" (noninactiveIP3R → inactiveIP3R)
- Reaction "SERCA_flux_FDH" (Ca_C → Ca_Ca_store)
- Reaction "SERCA_Palk" (Ca_C → Ca_Ca_store)
- Reaction "leak_Palk" (Ca_C → Ca_Ca_store)
- Reaction "IP3R_flux_FDH" (Ca_C → Ca_Ca_store)
- Reaction "RyR_Palk" (Ca_C → Ca_Ca_store)
- Reaction "IP3R_Palk" (Ca_C → Ca_Ca_store)
- Reaction "ER_leak_flux_FDH" (Ca_C → Ca_Ca_store)