Name: “neves_cell_2008”
Saved: Wed, 13 Aug 2008 18:04:17 GMT
vcell identifier: biomodel-28625786
Owned by: “susana”
- Compartment "cyto". (type: Volume)
- Species "G_GDP_cyto"
- Species "G_protein_cyto"
- Species "G_a_s_cyto"
- Species "GRK_bg_cyto"
- Species "PDE4_cyto"
- Species "ATP_cyto"
- Species "R2C2_cyto"
- Species "PP_PDE_cyto"
- Species "MAPK_active_cyto"
- Species "MEK_cyto"
- Species "MEK_active_cyto"
- Species "B_Raf_active_cyto"
- Species "bg_cyto"
- Species "B_Raf_cyto"
- Species "PKA_cyto"
- Species "AMP_cyto"
- Species "GRK_cyto"
- Species "PP2A_cyto"
- Species "MAPK_cyto"
- Species "PTP_cyto"
- Species "PTP_PKA_cyto"
- Species "c_R2C2_cyto"
- Species "c2_R2C2_cyto"
- Species "c3_R2C2_cyto"
- Species "PDE_high_km_cyto"
- Species "cAMP_cyto"
- Species "PTP_PP_cyto"
- Species "PDE4_P_cyto"
- Reaction "pde4_p" (cAMP_cyto → AMP_cyto)
- Reaction "PPase_Raf" (B_Raf_active_cyto → B_Raf_cyto)
- Reaction "PDE4" (cAMP_cyto → AMP_cyto)
- Reaction "bg_binds_GRK" (GRK_cyto + bg_cyto → GRK_bg_cyto)
- Reaction "MEK_activates_MAPK" (MAPK_cyto → MAPK_active_cyto)
- Reaction "PKA_activates_Raf" (B_Raf_cyto → B_Raf_active_cyto)
- Reaction "GTPase" (G_a_s_cyto → G_GDP_cyto)
- Reaction "trimer" (bg_cyto + G_GDP_cyto → G_protein_cyto)
- Reaction "A2" (c3_R2C2_cyto + cAMP_cyto → PKA_cyto)
- Reaction "highKM_PDE" (cAMP_cyto → AMP_cyto)
- Reaction "PKA_P_PTP" (PTP_cyto → PTP_PKA_cyto)
- Reaction "B1" (R2C2_cyto + cAMP_cyto → c_R2C2_cyto)
- Reaction "PKA_P_PDE" (PDE4_cyto → PDE4_P_cyto)
- Reaction "Raf_activates_MEK" (MEK_cyto → MEK_active_cyto)
- Reaction "PTP_PKA" (MAPK_active_cyto → MAPK_cyto)
- Reaction "B2" (c_R2C2_cyto + cAMP_cyto → c2_R2C2_cyto)
- Reaction "PTP" (MAPK_active_cyto → MAPK_cyto)
- Reaction "PPase_MAPK" (MAPK_active_cyto → MAPK_cyto)
- Reaction "pp2a_4" (PDE4_P_cyto → PDE4_cyto)
- Reaction "pp_ptp" (PTP_PKA_cyto → PTP_cyto)
- Reaction "PPase_mek" (MEK_active_cyto → MEK_cyto)
- Reaction "A1" (c2_R2C2_cyto + cAMP_cyto → c3_R2C2_cyto)
- Compartment "extra". (type: Volume)
- Species "iso_extra"
- Compartment "cyto_mem". (type: Membrane)
- Species "AC_active_cyto_mem"
- Species "iso_BAR_p_cyto_mem"
- Species "AC_PKA_cyto_mem"
- Species "BAR_cyto_mem"
- Species "BAR_G_cyto_mem"
- Species "iso_BAR_cyto_mem"
- Species "AC_cyto_mem"
- Species "iso_BAR_G_cyto_mem"
- Reaction "activate_Gs" (iso_BAR_G_cyto_mem → iso_BAR_cyto_mem + bg_cyto + G_a_s_cyto)
- Reaction "iso_binds_BAR" (BAR_cyto_mem + iso_extra → iso_BAR_cyto_mem)
- Reaction "AC_active" (ATP_cyto → cAMP_cyto)
- Reaction "G_binds_iso_BAR" (iso_BAR_cyto_mem + G_protein_cyto → iso_BAR_G_cyto_mem)
- Reaction "AC_activation" (G_a_s_cyto + AC_cyto_mem → AC_active_cyto_mem)
- Reaction "AC_basal" (ATP_cyto → cAMP_cyto)
- Reaction "GRK" (iso_BAR_cyto_mem → iso_BAR_p_cyto_mem)
- Reaction "iso_binds_BAR_g" (iso_extra + BAR_G_cyto_mem → iso_BAR_G_cyto_mem)
- Reaction "GRK_bg" (iso_BAR_cyto_mem → iso_BAR_p_cyto_mem)
- Reaction "G_binds_BAR" (BAR_cyto_mem + G_protein_cyto → BAR_G_cyto_mem)