Name: “Brown et al 2011 SCA1 Compensation Analysis”
Saved: Wed, 30 May 2012 12:33:09 GMT
vcell identifier: biomodel-66264206
Owned by: “Brown”
- Compartment "ER". (type: Volume)
- Species "Ca_ER"
- Compartment "Extracellular". (type: Volume)
- Species "Ca_Extracellular"
- Species "Ca_D_Extracellular"
- Compartment "spine". (type: Volume)
- Species "IP3_spine"
- Species "mAtaxin1_spine"
- Species "PP1a_spine"
- Species "Ca_spine"
- Species "ICpeptide_PP1a_spine"
- Species "CG_spine"
- Species "CGB_spine"
- Species "D28kB_spine"
- Species "D28kB_D_spine"
- Species "r_neck_spine"
- Species "r_spine_spine"
- Species "l_neck_spine"
- Species "D28k_high_D_spine"
- Species "D28k_high_spine"
- Species "PABCa_D_spine"
- Species "PABCa_spine"
- Species "PA_spine"
- Species "IP3_D_spine"
- Species "CGB_D_spine"
- Species "Mg_spine"
- Species "Ca_D_spine"
- Species "D28kB_high_D_spine"
- Species "PABMg_D_spine"
- Species "PA_D_spine"
- Species "D28k_spine"
- Species "D28kB_high_spine"
- Species "D28k_D_spine"
- Species "CG_D_spine"
- Species "Mg_D_spine"
- Species "PABMg_spine"
- Species "ICpeptide_mAtaxin1_spine"
- Species "ICpeptide_spine"
- Reaction "PABCa_d" (PABCa_spine → ∅)
- Reaction "CG_deg" (CG_D_spine → ∅)
- Reaction "D28kB_deg" (D28kB_D_spine → ∅)
- Reaction "PABCa_deg" (PABCa_D_spine → ∅)
- Reaction "D28k_d" (D28k_spine → ∅)
- Reaction "CGB_d" (CGB_spine → ∅)
- Reaction "CD28k_high" (Ca_spine + D28k_high_spine → D28kB_high_spine)
- Reaction "D28kBDbinding" (D28k_D_spine + Ca_D_spine → D28kB_D_spine)
- Reaction "CG_Dbinding" (Ca_D_spine + CG_D_spine → CGB_D_spine)
- Reaction "PA_deg" (PA_D_spine → ∅)
- Reaction "D28kB_high_deg" (D28kB_high_D_spine → ∅)
- Reaction "Ca_d" (Ca_spine → ∅)
- Reaction "CG_d" (CG_spine → ∅)
- Reaction "PA_MgD" (Mg_D_spine + PA_D_spine → PABMg_D_spine)
- Reaction "IP3_degr" (IP3_spine → ∅)
- Reaction "D28kB_high_d" (D28kB_high_spine → ∅)
- Reaction "D28k_deg" (D28k_D_spine → ∅)
- Reaction "PA_d" (PA_spine → ∅)
- Reaction "IP3deg" (IP3_D_spine → ∅)
- Reaction "CGbinding" (Ca_spine + CG_spine → CGB_spine)
- Reaction "PP1a bind ICpeptide" (PP1a_spine + ICpeptide_spine → ICpeptide_PP1a_spine)
- Reaction "mAtaxin1 bind ICpeptide" (mAtaxin1_spine + ICpeptide_spine → ICpeptide_mAtaxin1_spine)
- Reaction "D28kB_d" (D28kB_spine → ∅)
- Reaction "D28k_high_deg" (D28k_high_D_spine → ∅)
- Reaction "pulses" (∅ → IP3_spine)
- Reaction "CGB_deg" (CGB_D_spine → ∅)
- Reaction "PA_Mg" (PA_spine + Mg_spine → PABMg_spine)
- Reaction "CD28k_highDbinding" (Ca_D_spine + D28k_high_D_spine → D28kB_high_D_spine)
- Reaction "PABMg_deg" (PABMg_D_spine → ∅)
- Reaction "Ca_deg" (Ca_D_spine → ∅)
- Reaction "PA_Dbinding" (PA_D_spine + Ca_D_spine → PABCa_D_spine)
- Reaction "CaD28k_med" (D28k_spine + Ca_spine → D28kB_spine)
- Reaction "IP3_d" (IP3_spine → ∅)
- Reaction "D28k_high_d" (D28k_high_spine → ∅)
- Reaction "PABMg_d" (PABMg_spine → ∅)
- Reaction "PA_Ca" (PA_spine + Ca_spine → PABCa_spine)
- Reaction "IP3_degr1" (IP3_D_spine → ∅)
- Compartment "SM". (type: Membrane)
- Reaction "flux0" (Ca_Extracellular → Ca_spine)
- Reaction "flux1" (Ca_D_Extracellular → Ca_D_spine)
- Compartment "ER_SM". (type: Membrane)
- Species "ERDensity_ER_SM"
- Species "IP3R1_Ct_ER_SM"
- Species "IP3R1_Ct_PP1a_ER_SM"
- Species "IP3R1_Ct_mAtaxin_ER_SM"
- Species "h_ER_SM"
- Reaction "PP1a bind ICt" (IP3R1_Ct_ER_SM + PP1a_spine → IP3R1_Ct_PP1a_ER_SM)
- Reaction "mAtaxin1 bind ICt" (IP3R1_Ct_ER_SM + mAtaxin1_spine → IP3R1_Ct_mAtaxin_ER_SM)
- Reaction "reaction0" (h_ER_SM → ∅)
- Reaction "IP3R_flux" (Ca_spine → Ca_ER)
- Reaction "SERCA_flux" (Ca_spine → Ca_ER)
- Reaction "ER_leak_flux" (Ca_spine → Ca_ER)