publication

Main determinants of presynaptic Ca2+ dynamics at individual mossy fiber-CA3 pyramidal cell synapses
Scott, R., Rusakov, D. A.
J Neurosci. 2006;26(26):7071-81.
PUBMED:16807336      doi:10.1523/jneurosci.0946-06.2006

Modeling the impact of store-operated Ca2+ entry on intracellular Ca2+ oscillations
Kowalewski, J. M., Uhlen, P., Kitano, H., Brismar, H.
Math Biosci. 2006;204(2):232-49.
PUBMED:16620876      doi:10.1016/j.mbs.2006.03.001

Rapid redistribution of synaptic PSD-95 in the neocortex in vivo
Gray, N. W., Weimer, R. M., Bureau, I., Svoboda, K.
PLoS Biol. 2006;4(11):e370.
PUBMED:17090216      

Systems analysis of PKA-mediated phosphorylation gradients in live cardiac myocytes
Saucerman, J. J., Zhang, J., Martin, J. C., Peng, L. X., Stenbit, A. E., Tsien, R. Y., McCulloch, A. D.
Proceedings of the National Academy of Sciences. 103:12923-12928.
PUBMED:16905651      
   VCell BioModels referenced in publication:
   user: jsaucer,   model name: AKARmyocyte
   user: jsaucer,   model name: AKARmyocyte_2compart
   user: jsaucer,   model name: AKARmyocyte_no_cAMP_buffering

Modeling and analysis of calcium signaling events leading to long-term depression in cerebellar Purkinje cells
Hernjak, N., Slepchenko, B. M., Fernald, K., Fink, C. C., Fortin, D., Moraru,, II, Watras, J., Loew, L. M.
Biophysical Journal Volume 89, Dec. 2005, pp. 3790-3806
PUBMED:16169982      
   VCell BioModels referenced in publication:
   user: hernjak,   model name: purkinje_2D
   user: hernjak,   model name: purkinje_compartmental

Phospholipase C in living cells: activation, inhibition, Ca2+ requirement, and regulation of M current
Horowitz, L. F., Hirdes, W., Suh, B. C., Hilgemann, D. W., Mackie, K., Hille, B.
J. Gen. Physiol. 2005. 126(3):243-262.
PUBMED:16129772      
   VCell BioModels referenced in publication:
   user: hillelab,   model name: Horowitz2005JGPprobes

Quantitative elucidation of a distinct spatial gradient-sensing mechanism in fibroblasts
Schneider, I. C., Haugh, J. M.
J.Cell B 171:883-892 (2005)
PUBMED:16314431      
   VCell BioModels referenced in publication:
   user: jmhaugh,   model name: PDGF gradient sensing

Rearrangement of the endoplasmic reticulum and calcium transient formation: the computational approach
Pomorski, P., Targos, B., Baranska, J.
Biochem Biophys Res Commun. 2005;328(4):1126-32.
PUBMED:15707994      

STAT module can function as a biphasic amplitude filter
Mayya, V., Loew, L. M.
IEE Proceedings Systems Biology, March 2005, Volume 2, Issue 1, p. 43-52
PUBMED:17091582      
   VCell BioModels referenced in publication:
   user: mayya,   model name: STATmodulePaper

Adenine nucleotide regulation in pancreatic ?-cells: modeling of ATP/ADP-Ca2+ interactions
Fridlyand, Leonid E., Ma, Li, Philipson, Louis H.
Am J Physiol Endocrinol Metab. 2005;289(5):E839-48.
PUBMED:15985450      doi:10.1152/ajpendo.00595.2004
VCell MathModels referenced in publication:
user: Fridlyand,   model name: Chicago 2