publication-2009

An open model of actin dendritic nucleation
Ditlev, J. A., Vacanti, N. M., Novak, I. L., Loew, L. M.
Biophys J. 2009 96:3529-3542.
PUBMED:19413959      doi:10.1016/j.bpj.2009.01.037
VCell BioModels referenced in publication:
user: les,   model name: Actin Dendritic Nucleation
user: les,   model name: Actin Dendritic Nucleation_Detailed Branching
VCell MathModels referenced in publication:
user: les, model name: Actin Advection and Diffusion
user: les, model name: Actin Advection and Diffusion 2D Cylindrical Transform

Diffusion in Cytoplasm: Effects of Excluded Volume Due to Internal Membranes and Cytoskeletal Structures
Novak, Igor L., Kraikivski, Pavel, Slepchenko, Boris M.
Biophys J. 2009;97(3):758-67.
PUBMED:19651034      doi:10.1016/j.bpj.2009.05.036

Energetic requirements for processive elongation of actin filaments by FH1FH2-formins
Paul, A. S., Pollard, T. D.
J. Biol. Chem. 284:12533-40, 2009
PUBMED:19251693      doi:10.1074/jbc.M808587200
VCell BioModels referenced in publication:
user: abiggiep,   model name: Formin FH1FH2-Profilin-Actin Elongation (public)

Intracellular fluid flow in rapidly moving cells
Keren, Kinneret, Yam, Patricia T., Kinkhabwala, Anika, Mogilner, Alex, Theriot, Julie A.
Nat Cell Biol. 2009;11(10):1219-24.
PUBMED:19767741
doi:10.1038/ncb1965

Modeling spatial and temporal dynamics of chemotactic networks
Yang, L., Iglesias, P. A.
Chemotaxis: Methods and Protocols, Methods in Molecular Biology, vol. 571, pp. 489-505, 2009.
PUBMED:19763987      doi:10.1007/978-1-60761-198-1_32
   VCell BioModels referenced in publication:
   user: LiuYang,   model name: LEGI

Persistent cAMP-signals triggered by internalized G-protein-coupled receptors
Calebiro, D., Nikolaev, V. O., Gagliani, M. C., de Filippis, T., Dees, C., Tacchetti, C., Persani, L., Lohse, M. J.
PLoS Biol. 2009 Aug;7(8):e1000172 Publication Date: Epub 2009 Aug 18
PUBMED:19688034      
   VCell BioModels referenced in publication:
   user: davide.calebiro,   model name: Calebiro_PLoS-Biol_2009

Phosphodiesterase 1C is dispensable for rapid response termination of olfactory sensory neurons
Cygnar, K. D., Zhao, H.
Nat Neurosci. 12:454-62, 2009. PMID 19305400 2712288.
PUBMED:19305400      doi:10.1038/nn.2289
VCell BioModels referenced in publication:
user: cygnar,   model name: NatureNeuroscience2009

A Tridimensional Model of Proangiogenic Calcium Signals in Endothelial Cells
Munaron, L.
The Open Biology Journal, 2009, 2, 114-129 Publication Date: October 2009
doi:10.2174/1874196700902010114
   VCell BioModels referenced in publication:
   user: Annalisa03,   model name: lmunaron

Robustness and coherence of a three-protein circadian oscillator: landscape and flux perspectives
Wang, J., Xu, L., Wang, E.
Biophys J. 2009;97(11):3038-46.
PUBMED:19948134      doi:10.1016/j.bpj.2009.09.021

A genetically encoded reporter of synaptic activity in vivo
Dreosti, Elena, Odermatt, Benjamin, Dorostkar, Mario M., Lagnado, Leon
Nat Methods. 2009 Dec;6(12):883-9. Epub 2009 Nov 8.
PUBMED:19898484      doi:10.1038/nmeth.1399
VCell BioModels referenced in publication:
user: Leon,   model name: Fig.1v7
user: Leon,   model name: GECI_Synapse