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VCell Open Discussion Forum | |||
For all questions related to VCell use. |
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Contact VCell Support | |||
For all personal user issues relating to connectivity, login credentials, passwords, please email VCell Support.For questions about a specific model, please share the model with VCell Support. |
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CompCell Biology YouTube Channel Please visit for a complete listing of tutorials and workshop lectures. |
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| Tutorial Guides (pdf) for VCell |
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| Moving Boundaries |
| Multiple Application of a Nuclear Transport (Neuroblastoma Stack for Tutorial) (CSV File) (ver 7.2) |
| Rule-Based Modeling (single compartment) EGFR model (ver 6.1) |
| Rule-Based Modeling (multiple compartments with transport and anchoring) Ran model (ver 6.1) |
| simple FRAP (ver 7.2) |
| FRAP with binding (ver 7.2) |
| PH-GFP Translocation (ver 7.2) |
| Using Pathway Commmons (ver 6.0) |
| 2020 Computational Cell Biology Workshop | |
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| Video Description | Presenter |
| Basics of Reaction Kinetics and Diffusion | Les Loew |
| Virtual Cell (VCell) Tutorial | Ann Cowan |
| COPASI Tutorial | Pedro Mendes |
| Stochastic Simulations | Pedro Mendes, Boris Slepchenko |
| Deterministic Spatial Simulations | Masoud Nickaeen |
| SpringSaLaD Tutorial | Aniruddha Chattaraj |
| Rule-Based Modeling | Michael Blinov |
| Parameter Estimation | Stefan Hoops |
| VCell Video Tutorials |
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| VCell MultiApp Tutorial (ver 6.1): Part 1. Creating a Spatial Deterministic Model using Image-Based geometry (3D images for tutorial) |
| VCell MultiApp Tutorial (ver 6.1): Part 2. Compartmental and Spatial Stochastic Applications, (3D images for tutorial) |
| VCell FRAP Tutorial (Old Version 5.1) |
| VCell FRAP with Binding Tutorial (Old Version 5.1) |
| VCell PIP2 to IP3 Tutorial (Old Version 5.1 |
| VCell Using Pathway Commons (Old Version 5.1) |
| Quick Start Guides |
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| Quick Start Guide (6.0) |
| Rule-based Modeling Guide VCell 6.1 (single compartment) |
| Rule-based Modeling Guide VCell 6.1 (compartmental/spatial) |
| VCell Wikipedia Page |
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| VCell Wikipedia |
