VCell Open Discussion Forum | ||||
For all questions related to VCell use. |
Contact VCell Support | ||||
For all personal user issues relating to connectivity, login credentials, passwords, please email VCell Support.For questions about a specific model, please share the model with VCell Support. |
CompCell Biology YouTube Channel Please visit for a complete listing of tutorials and workshop lectures. |
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Tutorial Guides (pdf) for VCell |
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Moving Boundaries |
Multiple Application of a Nuclear Transport (Neuroblastoma Stack for Tutorial) (CSV File) (ver 7.2) |
Rule-Based Modeling (single compartment) EGFR model (ver 6.1) |
Rule-Based Modeling (multiple compartments with transport and anchoring) Ran model (ver 6.1) |
simple FRAP (ver 7.2) |
FRAP with binding (ver 7.2) |
PH-GFP Translocation (ver 7.2) |
Using Pathway Commmons (ver 6.0) |
2020 Computational Cell Biology Workshop | |
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Video Description | Presenter |
Basics of Reaction Kinetics and Diffusion | Les Loew |
Virtual Cell (VCell) Tutorial | Ann Cowan |
COPASI Tutorial | Pedro Mendes |
Stochastic Simulations | Pedro Mendes, Boris Slepchenko |
Deterministic Spatial Simulations | Masoud Nickaeen |
SpringSaLaD Tutorial | Aniruddha Chattaraj |
Rule-Based Modeling | Michael Blinov |
Parameter Estimation | Stefan Hoops |
VCell Video Tutorials |
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VCell MultiApp Tutorial (ver 6.1): Part 1. Creating a Spatial Deterministic Model using Image-Based geometry (3D images for tutorial) |
VCell MultiApp Tutorial (ver 6.1): Part 2. Compartmental and Spatial Stochastic Applications, (3D images for tutorial) |
VCell FRAP Tutorial (Old Version 5.1) |
VCell FRAP with Binding Tutorial (Old Version 5.1) |
VCell PIP2 to IP3 Tutorial (Old Version 5.1 |
VCell Using Pathway Commons (Old Version 5.1) |
Quick Start Guides |
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Quick Start Guide (6.0) |
Rule-based Modeling Guide VCell 6.1 (single compartment) |
Rule-based Modeling Guide VCell 6.1 (compartmental/spatial) |
VCell Wikipedia Page |
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VCell Wikipedia |