Ibrahim, B., 2015
In silico spatial simulations reveal that MCC formation and excess BubR1 are required for tight inhibition of the anaphase-promoting complex
Ibrahim, B.
Mol Biosyst. 2015;11(11):2867-77.
PUBMED:26256776 doi:10.1039/c5mb00395d
Kraikivski et al., 2015
From START to FINISH: computational analysis of cell cycle control in budding yeast
Kraikivski, Pavel, Chen, Katherine C., Laomettachit, Teeraphan, Murali, T. M., Tyson, John J.
npj Systems Biology and Applications 1 (2015) 15016
PUBMED:25790189 doi:10.1038/npjsba.2015.16
Li et al., 2015
Dendritic geometry shapes neuronal cAMP signalling to the nucleus
Li, L., Gervasi, N., Girault, J. A.
Nat Commun, 2015/02/18
PUBMED:25692798 doi:10.1038/ncomms7319
VCell BioModels referenced in publication:
user: luli, model name: Li2015_geometryCreatesNonlinearNuclearPKA
Brown et al., 2015
Computational neurobiology is a useful tool in translational neurology: the example of ataxia
Brown, S. A., McCullough, L. D., Loew, L. M.
Front Neurosci. 2015;9:1.
PUBMED:25653585 doi:10.3389/fnins.2015.00001
Timofeeva et al., 2015
Calmodulin as a major calcium buffer shaping vesicular release and short-term synaptic plasticity: facilitation through buffer dislocation
Timofeeva, Y., Volynski, K. E.
Front Cell Neurosci. 2015;9:239.
PUBMED:26190970 doi:10.3389/fncel.2015.00239
Boras et al., 2015
Bridging scales through multiscale modeling: a case study on protein kinase A
Boras, B. W., Hirakis, S. P., Votapka, L. W., Malmstrom, R. D., Amaro, R. E., McCulloch, A. D.
Front Physiol. 2015;6:250.
PUBMED:26441670 doi:10.3389/fphys.2015.00250
Singh et al., 2015
Analysis of AKAP7gamma Dimerization
Singh, A., Rigatti, M., Le, A. V., Carlson, C. R., Moraru,, II, Dodge-Kafka, K. L.
J Signal Transduct. 2015;2015:371626.
PUBMED:26417456 doi:10.1155/2015/371626
Boras et al., 2014
Using Markov state models to develop a mechanistic understanding of protein kinase A regulatory subunit RIalpha activation in response to cAMP binding
Boras, B. W., Kornev, A., Taylor, S. S., McCulloch, A. D.
J Biol Chem. 2014 Sep 8. pii: jbc.M114.568907
PUBMED:25202018 doi:10.1074/jbc.M114.568907
VCell BioModels referenced in publication:
user: bboras, model name: Boras_PKA-Dimer
user: bboras, model name: Boras_PKA-CBD-A
user: bboras, model name: Boras_PKA-Unconstrained
user: bboras, model name: Boras_PKA_Dimer_mutant_B-inhibited
user: bboras, model name: Boras_PKA_CBD-A_mutant_B-inhibited
user: bboras, model name: Boras_PKA-CBD-A
user: […]
Gertner et al., 2014
Synaptic excitation is regulated by the postsynaptic dSK channel at the Drosophila larval NMJ
Gertner, D. M., Desai, S., Lnenicka, G. A.
Journal of NeurophysiologyPublished 15 June 2014Vol. 111no. 2533-2543 DOI: 10.1152/jn.00903.2013
PUBMED:24671529 doi:10.1152/jn.00903.2013
VCell BioModels referenced in publication:
user: gregl, model name: epsp_gcs
Xue et al., 2014
Structural basis of thymosin-beta4/profilin exchange leading to actin filament polymerization
Xue, B., Leyrat, C., Grimes, J. M., Robinson, R. C.
Proc Natl Acad Sci USA. 2014;111(43):E4596-605.
PUBMED:25313062 doi:10.1073/pnas.1412271111