publication

CaMKII activation and dynamics are independent of the holoenzyme structure: an infinite subunit holoenzyme approximation
Michalski, P. J., Loew, L. M.
Phys Biol. 2012 Jun 8;9(3):036010.
PUBMED:22683827      doi:10.1088/1478-3975/9/3/036010
   VCell BioModels referenced in publication:
   user: pjmichal,   model name: BioNetGen CaMKII – Trimer – 3 states – with phosphatase
   user: pjmichal,   model name: BioNetGen CaMKII – Trimer – 6 states – with phosphatase
   user: pjmichal,   model name: CaMKII – Infinite Lattice – 6 states
   user: pjmichal,   model name: BioNetGen […]

Computational analysis of calcium signaling and membrane electrophysiology in cerebellar Purkinje neurons associated with ataxia
Brown, S. A., Loew, L. M.
BMC Syst Biol. 2012;6:70.
PUBMED:22703638      doi:10.1186/1752-0509-6-70

VCell BioModels referenced in publication:
user: Brown,   model name: Brown et al 2011 Analysis of SCA15-SCA16 with IC4 Peptide Application
user: Brown,   model name: Brown et al 2011 SCA1 Compensation Analysis
user: Brown,   model name: Brown et al 2011 Analysis of SCA1-SCA2-SCA3 with IC-G2736X Peptide
user: Brown,   model name: Brown et […]

Determinants of Formin Homology 1 (FH1) domain function in actin filament elongation by formins.
Courtemanche N, Pollard TD.
J Biol Chem. 2012 Mar 2;287(10):7812-20. doi: 10.1074/jbc.M111.322958. Epub 2012 Jan 14.
PUBMED:22247555
VCell BioModels referenced in publication:
user: abiggiep,   model name: Formin FH1FH2-Profilin-Actin Elongation (public)

Live-cell fluorescence microscopy with molecular biosensors: what are we really measuring?
Haugh, J. M.
Biophys J, 102 (9): 2003-2011 (2012).
PUBMED:22824263      doi:10.1016/j.bpj.2012.03.055
   VCell BioModels referenced in publication:
   user: jmhaugh,   model name: Biosensor simple

Protein diffusion in mammalian cell cytoplasm
Kuhn, T., Ihalainen, T. O., Hyvaluoma, J., Dross, N., Willman, S. F., Langowski, J., Vihinen-Ranta, M., Timonen, J.
PLoS ONE. 2011;6(8):e22962.
PUBMED:21886771      doi:10.1371/journal.pone.0022962

Purification of actin from fission yeast Schizosaccharomyces pombe and characterization of functional differences from muscle actin
Ti, S. C., Pollard, T. D.
Journal of Biological Chemistry, 2011, 286(7), 5784-92 Publication Date: Dec 9, 2010
PUBMED:21148484      doi: 10.1074/jbc.M110.199794
   VCell BioModels referenced in publication:
   user: SCT,   model name: Pirelease 09/07

Quantifying the Waddington landscape and biological paths for development and differentiation
Wang, J., Zhang, K., Xu, L., Wang, E.
Proc Natl Acad Sci USA. 2011;108(20):8257-62.
PUBMED:21536909      doi:10.1073/pnas.1017017108

Signaling network triggers and membrane physical properties control the actin cytoskeleton-driven isotropic phase of cell spreading
Rangamani, P., Fardin, M. A., Xiong, Y., Lipshtat, A., Rossier, O., Sheetz, M. P., Iyengar, R.
Biophys J. 2011 Feb 16;100(4):845-57.
PUBMED:21320428      doi: 10.1016/j.bpj.2010.12.3732

An Adhesion-Dependent Switch between Mechanisms That Determine Motile Cell Shape
Barnhart, E. L., Lee, K. C., Keren, K., Mogilner, A., Theriot, J. A.
PLoS Biol. 2011;9(5):e1001059.
PUBMED:21559321      doi:10.1371/journal.pbio.1001059

Switching Cdk2 On or Off with Small Molecules to Reveal Requirements in Human Cell Proliferation
Merrick, Karl A, Wohlbold, Lara, Zhang, Chao, Allen, Jasmina J, Horiuchi, Dai, Huskey, Noelle E, Goga, Andrei, Shokat, Kevan M, Fisher, Robert P
Mol Cell. 2011;42(5):624-36.
PUBMED:21658603      doi:10.1016/j.molcel.2011.03.031