publication-2013

Modeling and Simulation of Intracellular Drug Transport and Disposition Pathways with Virtual Cell
Baik, J., Rosania, G. R.
2013;1(1): 8., J Pharmaceu Pharmacol, June 2013 Vol.:1, Issue:1
PUBMED:24364041      
VCell BioModels referenced in publication:
user: jsbaik,   model name: Baik & Rosania 2013 JPP – 01 Suspension model no lysosome
user: jsbaik,   model name: Baik & Rosania 2013 JPP – 02 Transcellular model no lysosome
user: jsbaik,   model name: Baik & Rosania 2013 JPP – 03 Transcellular model with lysosome […]

Mutations in DNA binding and transactivation domains affect the dynamics of parvovirus NS1 protein
Niskanen, E. A., Kalliolinna, O., Ihalainen, T. O., Hakkinen, M., Vihinen-Ranta, M.
J Virol. 2013;87(21):11762-74.
PUBMED:23986577      doi:10.1128/JVI.01678-13

Protein equilibration through somatic ring canals in Drosophila
McLean, P. F., Cooley, L.
Science. 2013 Jun 21;340(6139):1445-1447. Epub 2013 May 23.
PUBMED:23704373      doi:10.1126/science.1234887
   VCell BioModels referenced in publication:
   user: peterfoster,   model name: PAGFP Diffusion COMPARTMENTAL_4Cell_01
   user: peterfoster,   model name: PAGFP Diffusion COMPARTMENTAL_3Cell_02
   user: peterfoster,   model name: PAGFP Diffusion COMPARTMENTAL_3Cell_01
   user: peterfoster,   model name: 2 Cell Spatial CORR 1/4Cell_01

Quantitative properties and receptor reserve of the DAG and PKC branch of G(q)-coupled receptor signaling
Falkenburger, B. H., Dickson, E. J., Hille, B.
J. Gen. Physiol. 2013; 141:537-555
PUBMED:23630338      doi:10.1085/jgp.201210887
   VCell BioModels referenced in publication:
   user: bfalken,   model name: FalkenburgerDicksonHille2013

Quantitative properties and receptor reserve of the IP(3) and calcium branch of G(q)-coupled receptor signaling
Dickson, E. J., Falkenburger, B. H., Hille, B.
J. Gen. Physiol. 2013; 141:521-535.
PUBMED:23630337      doi:10.1085/jgp.201210886
   VCell BioModels referenced in publication:
   user: bfalken,   model name: FalkenburgerDicksonHille2013

Computational Analysis of Rho GTPase Cycling
Cibele V Falkenberg, Leslie M Loew
PLoS Comput Biol. 2013 9(1): e1002831. doi:10.1371/journal.pcbi.1002831 PLoS Comput Biol 9(1): e1002831. doi:10.1371/journal.pcbi.1002831
PUBMED:23326220      doi:10.1371/journal.pcbi.1002831
   VCell BioModels referenced in publication:
   user: falkenbe,   model name: Falkenberg_GTPases_Rac_betaCell

Recycling of kinesin-1 motors by diffusion after transport
Blasius, T. L., Reed, N., Slepchenko, B. M., Verhey, K. J.
PLoS ONE. 2013;8(9):e76081.
PUBMED:24098765      doi:10.1371/journal.pone.0076081

Decoding information in cell shape
Rangamani, P., Lipshtat, A., Azeloglu, E. U., Calizo, R. C., Hu, M., Ghassemi, S., Hone, J., Scarlata, S., Neves, S. R., Iyengar, R.
Cell, 2013, 154:1356-1369.
PUBMED:24034255      doi:10.1016/j.cell.2013.08.026
   VCell BioModels referenced in publication:
   user: prangamani,   model name: EGF ras Sep 2012
   user: prangamani,   model name: PDGF Src March 2012
   user: prangamani,   model name: Rangamani Cell 2013 B2R signaling

Tension modulates actin filament polymerization mediated by formin and profilin
Courtemanche, N., Lee, J. Y., Pollard, T. D., Greene, E. C.
Proc Natl Acad Sci USA. 2013;110(24):9752-7.
PUBMED:23716666      doi:10.1073/pnas.1308257110

Differential triggering of spontaneous glutamate release by P/Q-, N- and R-type Ca2+ channels
Ermolyuk, Y. S., Alder, F. G., Surges, R., Pavlov, I. Y., Timofeeva, Y., Kullmann, D. M., Volynski, K. E.
Nat Neurosci. 2013;16(12):1754-63.
PUBMED:24185424      doi:10.1038/nn.3563