publication-2012

Stoichiometry of Nck-dependent actin polymerization in living cells
Ditlev, J. A., Michalski, P. J., Huber, G., Rivera, G. M., Mohler, W. A., Loew, L. M., Mayer, B. J.
J Cell Biol 197 (5): 643-658, May 21, 2012
PUBMED:22613834      doi:10.1083/jcb.201111113
   VCell BioModels referenced in publication:
   user: JDitlev,   model name: Nck Induces Actin Comet Tail Formation – Single NWASP Activation of Arp2/3. Simplified Actin Dendritic Nucleation.
   user: JDitlev,   model name: Nck Induces Actin Comet Tail Formation – Dimer NWASP Activation […]

A computational systems analysis of factors regulating alpha cell glucagon secretion
Fridlyand, L. E., Philipson, L. H.
Islets. 2012;4(4):262-83.
PUBMED:23093806      doi:10.4161/isl.22193
VCell MathModels referenced in publication:
user: Fridlyand,   model name: Alpha and beta cell glucose sensing
user: Fridlyand,   model name: Glucagon secretion

Assessment of cellular mechanisms contributing to cAMP compartmentalization in pulmonary microvascular endothelial cells
Feinstein, W. P., Zhu, B., Leavesley, S. J., Sayner, S. L., Rich, T. C.
Am J Physiol, Cell Physiol. 2012;302(6):C839-52.
PUBMED:22116306      doi:10.1152/ajpcell.00361.2011

CaMKII activation and dynamics are independent of the holoenzyme structure: an infinite subunit holoenzyme approximation
Michalski, P. J., Loew, L. M.
Phys Biol. 2012 Jun 8;9(3):036010.
PUBMED:22683827      doi:10.1088/1478-3975/9/3/036010
   VCell BioModels referenced in publication:
   user: pjmichal,   model name: BioNetGen CaMKII – Trimer – 3 states – with phosphatase
   user: pjmichal,   model name: BioNetGen CaMKII – Trimer – 6 states – with phosphatase
   user: pjmichal,   model name: CaMKII – Infinite Lattice – 6 states
   user: pjmichal,   model name: BioNetGen […]

Computational analysis of calcium signaling and membrane electrophysiology in cerebellar Purkinje neurons associated with ataxia
Brown, S. A., Loew, L. M.
BMC Syst Biol. 2012;6:70.
PUBMED:22703638      doi:10.1186/1752-0509-6-70

VCell BioModels referenced in publication:
user: Brown,   model name: Brown et al 2011 Analysis of SCA15-SCA16 with IC4 Peptide Application
user: Brown,   model name: Brown et al 2011 SCA1 Compensation Analysis
user: Brown,   model name: Brown et al 2011 Analysis of SCA1-SCA2-SCA3 with IC-G2736X Peptide
user: Brown,   model name: Brown et […]

Determinants of Formin Homology 1 (FH1) domain function in actin filament elongation by formins.
Courtemanche N, Pollard TD.
J Biol Chem. 2012 Mar 2;287(10):7812-20. doi: 10.1074/jbc.M111.322958. Epub 2012 Jan 14.
PUBMED:22247555
VCell BioModels referenced in publication:
user: abiggiep,   model name: Formin FH1FH2-Profilin-Actin Elongation (public)

Live-cell fluorescence microscopy with molecular biosensors: what are we really measuring?
Haugh, J. M.
Biophys J, 102 (9): 2003-2011 (2012).
PUBMED:22824263      doi:10.1016/j.bpj.2012.03.055
   VCell BioModels referenced in publication:
   user: jmhaugh,   model name: Biosensor simple

Spatial modeling of cell signaling networks
Cowan, A. E., Moraru,, II, Schaff, J. C., Slepchenko, B. M., Loew, L. M.
Methods Cell Biol. 2012;110:195-221
PUBMED:22482950      doi:10.1016/B978-0-12-388403-9.00008-4
VCell BioModels referenced in publication:
user: les,   model name: Membrane Flux for meth cell biology

Spatiotemporal regulation of PKC via interactions with AKAP7 isoforms
Redden, J. M., Le, A. V., Singh, A., Federkiewicz, K., Smith, S., Dodge-Kafka, K. L.
Biochem J. 2012;446(2):301-9.
PUBMED:22670899      doi:10.1042/BJ20120366