Sayyid et al., 2016
On the importance of modelling the internal spatial dynamics of biological cells
Sayyid, F., Kalvala, S.
Biosystems. 2016 Jul;145:53-66.
PUBMED:27262415 doi:10.1016/j.biosystems.2016.05.012
Fridlyand et al., 2016
Pancreatic Beta Cell G-Protein Coupled Receptors and Second Messenger Interactions: A Systems Biology Computational Analysis
Fridlyand, L. E., Philipson, L. H.
PLoS ONE. 2016;11(5):e0152869.
PUBMED:27138453 doi:10.1371/journal.pone.0152869
VCell MathModels referenced in publication:
user: Fridlyand, model name: Messengers interaction
Yang et al., 2016
A Computational Modeling and Simulation Approach to Investigate Mechanisms of Subcellular cAMP Compartmentation
Yang, P. C., Boras, B. W., Jeng, M. T., Docken, S. S., Lewis, T. J., McCulloch, A. D., Harvey, R. D., Clancy, C. E.
PLoS Comput Biol. 2016;12(7):e1005005.
PUBMED:27409243 doi:10.1371/journal.pcbi.1005005
VCell BioModels referenced in publication:
user: bboras, model name: Boras-Diffusional Study-1000xPDEtest4
user: bboras, model name: Boras-Diffusional Study-250xPDEtest4
user: bboras, model name: Boras-Diffusional Study No geometry1x larger
user: bboras, model name: Boras-Diffusional Study No geometry10x larger
user: […]
Rangamani et al., 2016
Paradoxical signaling regulates structural plasticity in dendritic spines
Rangamani, P., Levy, MG, Khan, S., Oster, G.
Proc Natl Acad Sci USA. 2016;113(36):E5298-307.
PUBMED:27551076 doi:10.1073/pnas.1610391113
VCell BioModels referenced in publication:
user: prangamani, model name: Spine Model Final Rangamani et al PNAS 2016
Rezgui et al., 2015
Integration of SBML models for the description of biological system in a lab-on-chip
Rezgui, A., Madec, M., Lallement, C., Haiech, J.
Mixed Design of Integrated Circuits & Systems (MIXDES), 2015 22nd International Conference, Torun, 2015, pp. 165-170.
doi:10.1109/MIXDES.2015.7208504
Karttunen et al., 2015
Non-structural proteins P17 and P33 are involved in the assembly of the internal membrane-containing virus PRD1
Karttunen, J., Mantynen, S., Ihalainen, T. O., Bamford, J. K., Oksanen, H. M.
Virology. 2015;482:225-33.
PUBMED:25880114 doi:10.1016/j.virol.2015.03.049
Rigatti et al., 2015
Phosphorylation state-dependent interaction between AKAP7delta/gamma and phospholamban increases phospholamban phosphorylation
Rigatti, M., Le, A. V., Gerber, C., Moraru,, II, Dodge-Kafka, K. L.
Cellular Signaling, June 3rd 2015
PUBMED:26027516 doi:10.1016/j.cellsig.2015.05.016
VCell BioModels referenced in publication:
user: Marc.Rigatti, model name: AKAP7_PLB_Binding_2PKA
Zakharova et al., 2015
Platelet surface-associated activation and secretion-mediated inhibition of coagulation factor XII
Zakharova, N. V., Artemenko, E. O., Podoplelova, N. A., Sveshnikova, A. N., Demina, I. A., Ataullakhanov, F. I., Panteleev, M. A.
Journal: PLoS ONE 10(2): e0116665. doi:10.1371/journal.pone.0116665 Publication Date: February 17, 2015
PUBMED:25688860 doi:10.1371/journal.pone.0116665
VCell BioModels referenced in publication:
user: agolomy, model name: fXii_activation
Singh et al., 2015
Analysis of AKAP7gamma Dimerization
Singh, A., Rigatti, M., Le, A. V., Carlson, C. R., Moraru,, II, Dodge-Kafka, K. L.
J Signal Transduct. 2015;2015:371626.
PUBMED:26417456 doi:10.1155/2015/371626
Ibrahim, B., 2015
Spindle assembly checkpoint is sufficient for complete Cdc20 sequestering in mitotic control
Ibrahim, B.
Comput Struct Biotechnol J. 2015;13:320-8.
PUBMED:25977749 doi:10.1016/j.csbj.2015.03.006