A Reaction-Diffusion Model Explains Amplification of the PLC/PKC Pathway in Fibroblast Chemotaxis.
Mohan,K1, Nosbisch,JL, Elston,TC, Bear,JE, Haugh,JM
Biophys J. 2017 Jul 11;113(1):185-194.
PUBMED:28700916 doi:10.1016/j.bpj.2017.05.035
VCell BioModels referenced in publication:
user: jnosbis, model name: Mohan chemotaxis 2017
Activation of the contact pathway of blood coagulation on the circulating microparticles may explain blood plasma coagulation induced by dilution
Chelushkin,MA, Panteleev,MA, Sveshnikova,AN
Biochemistry (Moscow), Supplement Series A: Membrane and Cell Biology. 2017;11(2):130–143
doi:10.1134/S1990747817020040
Cell shape information is transduced through tension-independent mechanisms
Ron, A., Azeloglu, E.U., Calizo, R.C., Hu, M., Bhattacharya, S., Chen, Y., Jayaraman, G., Lee, S., Neves-Zaph, S.R., Li, H., Gordon, R.E.
Nature communications. 2017; 8(1), p.2145.
PUBMED:28652372 doi:10.1038/s41467-017-02218-4
Fission yeast myo2: Molecular organization and diffusion in the cytoplasm
Friend, J. E., Sayyad, W. A., Arasada, R., McCormick, C. D., Heuser, J. E., Pollard, T. D.
Cytoskeleton. 2017 Dec 4.
PUBMED:29205883 doi:10.1002/cm.21425
VCell BioModels referenced in publication:
user: Wasim, model name: Yeast 3D_FRAP
Fragility of foot process morphology in kidney podocytes arises from chaotic spatial propagation of cytoskeletal instability
Falkenberg,CV, Azeloglu,EU, Stothers,M, Deerinck,TJ, Chen,Y, He,JC, Ellisman,MH, Hone,JC, Iyengar,R, Loew,LM
PLoS Comput Biol. 2017 Mar 16;13(3):e1005433.
PUBMED:28301477 doi:10.1371/journal.pcbi.1005433
VCell BioModels referenced in publication:
user: falkenbe, model name: Falkenberg_PodocyteStability
Numerical Approach to Spatial Deterministic-Stochastic Models Arising in Cell Biology
Schaff, J.C., Gao, F., Li, Y., Novak, I.L., Slepchenko, B.M.
PLoS Comput Biol. 2016 Dec 13;12(12):e1005236.
PUBMED:27959915 doi:10.1371/journal.pcbi.1005236
VCell MathModels referenced in publication:
user: boris, mathmodel name: Hybrid_cell_polarity_public
On the importance of modelling the internal spatial dynamics of biological cells
Sayyid, F., Kalvala, S.
Biosystems. 2016 Jul;145:53-66.
PUBMED:27262415 doi:10.1016/j.biosystems.2016.05.012
Pancreatic Beta Cell G-Protein Coupled Receptors and Second Messenger Interactions: A Systems Biology Computational Analysis
Fridlyand, L. E., Philipson, L. H.
PLoS ONE. 2016;11(5):e0152869.
PUBMED:27138453 doi:10.1371/journal.pone.0152869
VCell MathModels referenced in publication:
user: Fridlyand, model name: Messengers interaction
A Computational Modeling and Simulation Approach to Investigate Mechanisms of Subcellular cAMP Compartmentation
Yang, P. C., Boras, B. W., Jeng, M. T., Docken, S. S., Lewis, T. J., McCulloch, A. D., Harvey, R. D., Clancy, C. E.
PLoS Comput Biol. 2016;12(7):e1005005.
PUBMED:27409243 doi:10.1371/journal.pcbi.1005005
VCell BioModels referenced in publication:
user: bboras, model name: Boras-Diffusional Study-1000xPDEtest4
user: bboras, model name: Boras-Diffusional Study-250xPDEtest4
user: bboras, model name: Boras-Diffusional Study No geometry1x larger
user: bboras, model name: Boras-Diffusional Study No geometry10x larger
user: […]
Paradoxical signaling regulates structural plasticity in dendritic spines
Rangamani, P., Levy, MG, Khan, S., Oster, G.
Proc Natl Acad Sci USA. 2016;113(36):E5298-307.
PUBMED:27551076 doi:10.1073/pnas.1610391113
VCell BioModels referenced in publication:
user: prangamani, model name: Spine Model Final Rangamani et al PNAS 2016
