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publication-2022

Ruiter et al., 2023

Michael Blinov 2023-03-09T02:02:50+00:00 February 1st, 2023|publication, publication-2022|

Optimization of Media Change Intervals through Hydrogels Using Mathematical Models.
Ruiter FA, King J, Swapnasrita S, Giselbrecht S.
Biomacromolecules. 2023 Feb 13;24(2):604-612.
PUBMED:36724373
doi:10.1021/acs.biomac.2c00961

Khan et al., 2023

Michael Blinov 2023-03-09T01:52:47+00:00 January 7th, 2023|publication, publication-2022|

Methodology for development of single cell dendritic spine (SCDS) synaptic tagging and capture model using Virtual Cell (VCell). 
Khan R, Kulasiri D, Samarasinghe S.
MethodsX. 2023 Feb 11;10:102070.
PUBMED:36879764
doi:10.1016/j.mex.2023.102070

Khan et al., 2022

Michael Blinov 2022-11-22T21:22:12+00:00 November 22nd, 2022|publication, publication-2022|

A multifarious exploration of synaptic tagging and capture hypothesis in synaptic plasticity: Development of an integrated mathematical model and computational experiments. 
Khan R, Kulasiri D, Samarasinghe S.
Journal of Theoretical Biology. 2022 Oct 21:111326.
PUBMED:36279957
doi:10.1016/j.jtbi.2022.111326

Mendonça et al., 2022

Michael Blinov 2022-11-22T21:05:25+00:00 November 22nd, 2022|publication, publication-2022|

Asynchronous glutamate release is enhanced in low release efficacy synapses and dispersed across the active zone.
Mendonça PR, Tagliatti E, Langley H, Kotzadimitriou D, Zamora-Chimal CG, Timofeeva Y, Volynski KE.
Nature communications. 2022 Jun 17;13(1):1-7.
PUBMED:35715404
doi:10.1038/s41467-022-31070-4

Sinner and Townsend, 2022

Michael Blinov 2022-10-03T22:00:00+00:00 October 3rd, 2022|publication, publication-2022|

Purification and characterization of sequential cobalamin-dependent radical SAM methylases ThnK and TokK in carbapenem β-lactam antibiotic biosynthesis. 
Sinner EK, Townsend CA.
Methods in Enzymology. 2022; 669:29–44
PUBMED:35644176
https://doi.org/10.1016/bs.mie.2021.09.014

Dreyer et al., 2022

acowan 2022-05-18T14:08:48+00:00 April 15th, 2022|publication, publication-2022|

Transporter networks can serve plant cells as nutrient sensors and mimic transceptor-like behavior.
Dreyer I, Li K, Riedelsberger J, Hedrich R, Konrad KR, Michard E.
iScience. 2022 Apr 15;25(4):104078.
PUBMED:35378857
doi:10.1016/j.isci.2022.104078
VCell BioModels referenced in publication
user: idreyer
Biomodel name: Dreyer_et_al_2022_iScience

Nosbisch et al., 2022

Michael Blinov 2023-03-09T01:31:44+00:00 March 31st, 2022|publication, publication-2022|

A kinetic model of phospholipase C-γ1 linking structure-based insights to dynamics of enzyme autoinhibition and activation. 
Nosbisch JL, Bear JE, Haugh JM.
J Biol Chem. 2022 May;298(5):101886.
PUBMED:35367415
doi: 10.1016/j.jbc.2022.101886

Knox et al., 2022

acowan 2022-05-18T13:56:18+00:00 February 1st, 2022|publication, publication-2022|

Structure of a B12-dependent radical SAM enzyme in carbapenem biosynthesis.
Knox HL, Sinner EK, Townsend CA, Boal AK, Booker SJ.
Nature. 2022 Feb 10;602(7896):343–348.
PUBMED:35110734
doi:10.1038/s41586-021-04392-4

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