2019-12-10. VCell 7.2 has been released. See the Release Notes for a full list of the many new features in VCell 7.2 including new functionality to store identifiers and text annotations for model components, a service linking VCell simulation with ImageJ image analysis functions, rate rules and assignment rules in ODE applications, improved SBML import along with several other improvements.
A predictive computational model reveals that giv/girdin serves as a tunable valve for egfr-stimulated cyclic amp signals.
Getz, M., L. Swanson, D. Sahoo, P. Ghosh, and P. Rangamani
Mol Biol Cell. 2019 30: 1621-1633.
PUBMED:31017840
doi:10.1091/mbc.E18-10-0630
VCell BioModels referenced in publication:
user: mgetz, model name: A predictive computational model reveals that GIV/Girdin serves as a tunable valve for EGFR-stimulated Cyclic AMP Signals
Name: “A predictive computational model reveals that GIV/Girdin serves as a tunable valve for EGFR-stimulated Cyclic AMP Signals”
Saved: Apr 30, 2019
vcell identifier: biomodel-156134818
Owned by: “mgetz”
2019-06-13. A new Molecular Biology of the Cell publication from the Rangamani lab uses VCell and COPASI to develop a model to examine cross-talk between receptor tyrosine kinases and G proteins that regulate cAMP levels. Visit our published models page for links to the paper and to the VCell Biomodel.
Nutrient exchange in arbuscular mycorrhizal symbiosis from a thermodynamic point of view.
Dreyer, I., O. Spitz, K. Kanonenberg, K. Montag, M.R. Handrich, S. Ahmad, S. Schott-Verdugo, C. Navarro-Retamal, M.E. Rubio-Melendez, J.L. Gomez-Porras, J. Riedelsberger, M.A. Molina-Montenegro, A. Succurro, A. Zuccaro, S.B. Gould, P. Bauer, L. Schmitt, and H. Gohlke
New Phytol. 2019 222: 1043-1053.
PUBMED:30565261
doi:10.1111/nph.15646
VCell BioModels referenced in publication:
user: idreyer, model name: AMF Symbiosis with SWEET
2019-06-04. A new publication in Science Signaling from the Haugh and Rao labs describes the use of VCell modeling to assist in designing improved SH2 domain biosensors of EGFR phosphorylation. Visit our published models page for links to the paper and to the VCell Biomodel.
Design and evaluation of engineered protein biosensors for live-cell imaging of EGFR phosphorylation.
Tiruthani, K., A. Mischler, S. Ahmed, J. Mahinthakumar, J.M. Haugh, and B.M. Rao
Science Signaling 2019, 12 (584), eaap7584
PUBMED:31164479
doi:10.1126/scisignal.aap7584
VCell BioModels referenced in publication:
user: jmhaugh, model name: SH2 biosensor
Name: “Design and evaluation of engineered protein biosensors for live-cell imaging of EGFR phosphorylation”
Saved: May 19, 2015
vcell identifier: biomodel-94891280
Owned by: “jmhaugh”
Name: “Surve_et_alRAF1”
Saved: Wed, 20 Apr 2005
vcell identifier: biomodel-147699816
Owned by: “pmyers1995”
Name: “AMF Symbiosis with SWEET”
Saved: Jul 30, 2018
vcell identifier: biomodel-136977463
Owned by: “idreyer”
