A Reaction-Diffusion Model Explains Amplification of the PLC/PKC Pathway in Fibroblast Chemotaxis.
Mohan,K1, Nosbisch,JL, Elston,TC, Bear,JE, Haugh,JM
Biophys J. 2017 Jul 11;113(1):185-194.
PUBMED:28700916      doi:10.1016/j.bpj.2017.05.035
   VCell BioModels referenced in publication:
   user: jnosbis,   model name: Mohan chemotaxis 2017

Activation of the contact pathway of blood coagulation on the circulating microparticles may explain blood plasma coagulation induced by dilution
Chelushkin,MA, Panteleev,MA, Sveshnikova,AN
Biochemistry (Moscow), Supplement Series A: Membrane and Cell Biology. 2017;11(2):130–143
doi:10.1134/S1990747817020040

Fragility of foot process morphology in kidney podocytes arises from chaotic spatial propagation of cytoskeletal instability
Falkenberg,CV, Azeloglu,EU, Stothers,M, Deerinck,TJ, Chen,Y, He,JC, Ellisman,MH, Hone,JC, Iyengar,R, Loew,LM
PLoS Comput Biol. 2017 Mar 16;13(3):e1005433.
PUBMED:28301477      doi:10.1371/journal.pcbi.1005433
   VCell BioModels referenced in publication:
   user: falkenbe,   model name: Falkenberg_PodocyteStability

Plant potassium channels are in general dual affinity uptake systems
Dreyer,I
AIMS Biophysics, 2017, 4(1): 90-106.
doi:10.3934/biophy.2017.1.90
    VCell BioModels referenced in publication:
    user: idreyer    model name: Dreyer_2017_AIMS Biophysics

The fungal UmSrt1 and maize ZmSUT1 sucrose transporters battle for plant sugar resources
Wittek,A, Dreyer,I, Al-Rasheid,KAS, Sauer,N, Hedrich,R, Geiger,D
J Integr Plant Biol. 2017 Jun;59(6):422-435.
PUBMED:28296205      doi:10.1111/jipb.12535
   VCell BioModels referenced in publication:
   user: idreyer,;  model name: Wittek_et_al_JIntegrPlantBiol_2017_Phloem Fungus

A Computational Modeling and Simulation Approach to Investigate Mechanisms of Subcellular cAMP Compartmentation
Yang, P. C., Boras, B. W., Jeng, M. T., Docken, S. S., Lewis, T. J., McCulloch, A. D., Harvey, R. D., Clancy, C. E.
PLoS Comput Biol. 2016;12(7):e1005005.
PUBMED:27409243      doi:10.1371/journal.pcbi.1005005
   VCell BioModels referenced in publication:
   user: bboras,   model name: Boras-Diffusional Study-1000xPDEtest4
   user: bboras,   model name: Boras-Diffusional Study-250xPDEtest4
   user: bboras,   model name: Boras-Diffusional Study No geometry1x larger
   user: bboras,   model name: Boras-Diffusional Study No geometry10x larger
   user: bboras,   model name: Boras-Diffusional Study-25xPDEtest4
   user: bboras,   model name: Boras-Diffusional Study-100xPDEtest7
   user: bboras,   model name: Boras-Diffusional Study-10xPDEtest5
   user: bboras,   model name: Boras-Diffusional Study-100xPDEtest5
   user: bboras,   model name: Boras-Diffusional Study-100xPDEtest6 for images
   user: bboras,   model name: Boras-Diffusional Study-1xPDEtest5

A Noncanonical Binding Site in the EVH1 Domain of VASP Regulates Its Interactions with the Proline Rich Region of Zyxin
Acevedo, LA, Greenwood, AI, Nicholson, LK
Biochemistry. Aug 23.
PMID: 28783324    doi:10.1021/acs.biochem.7b00618

Contributions of protein kinases and beta-arrestin to termination of protease-activated receptor 2 signaling
Jung, S. R., Seo, J. B., Deng, Y., Asbury, C. L., Hille, B., Koh, D. S.
J Gen Physiol. 2016;147(3):255-71.
PUBMED:26927499      doi:10.1085/jgp.201511477
   VCell BioModels referenced in publication:
   user: jsr007,   model name: hillelab: JungSR_PAR2_desensitization2015

Cooperation through Competition—Dynamics and Microeconomics of a Minimal Nutrient Trade System in Arbuscular Mycorrhizal Symbiosis
Schott, Stephan, Valdebenito, Braulio, Bustos, Daniel, Gomez-Porras, Judith L., Sharma, Tripti, Dreyer, Ingo
Front Plant Sci. 2016 Jun 27;7:912.
PUBMED:27446142      doi:10.3389/fpls.2016.00912
    VCell BioModels referenced in publication:
    user: idreyer,    model name: Schott_et_al_2016 AMF Symbiosis with SWEET

Cross-regulation of phosphodiesterase-1 and phosphodiesterase-2 activities controls dopaminemediated striatal alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (ampa) receptor trafficking.
Song, R.S., Tolentino, R., Sobie, E.A., Neves-Zaph, S.R.
J Biol Chem. 2016 Sep 7. pii: jbc.M116.749747
PUBMED:27605670      doi:10.1074/jbc.M116.749747
   VCell BioModels referenced in publication:
   user: rsong,   model name: RS_JBC2016

Dynamics of Phosphoinositide-Dependent Signaling in Sympathetic Neurons
Kruse, M., Vivas, O., Traynor-Kaplan, A., Hille, B.
J Neurosci. 2016;36(4):1386-400.
PUBMED:26818524      doi:10.1523/JNEUROSCI.3535-15.2016
   VCell BioModels referenced in publication:
   user: mkruse,   model name: hillelab: KruseVivasTraynorKaplanHille_PI-metabolism_SCG_2015

Hysteresis-like binding of coagulation factors X/Xa to procoagulant activated platelets and phospholipids results from multistep association and membrane-dependent multimerization
Podoplelova, N. A., Sveshnikova, A. N., Kurasawa, J. H., Sarafanov, A. G., Chambost, H., Vasil&apos, ev, S. A., Demina, I. A., Ataullakhanov, F. I., Alessi, M. C., Panteleev, M. A.
Biochim Biophys Acta. 2016;1858(6):1216-27.
PUBMED:26874201      doi:10.1016/j.bbamem.2016.02.008
   VCell BioModels referenced in publication:
   user: agolomy,   model name: fX_platelet_binding
   user: agolomy,   model name: fX_thrombus_binding

Modeling Excitable Dynamics of Chemotactic Networks
Bhattacharya, S., Iglesias, P. A.
Methods Mol Biol. 2016;1407:397-415.
PUBMED:27271916      doi:10.1007/978-1-4939-3480-5_27
   VCell BioModels referenced in publication:
   user: sayak66,   model name: BEN
   user: sayak66,   model name: Smoldyn

Numerical Approach to Spatial Deterministic-Stochastic Models Arising in Cell Biology
Schaff, J.C., Gao, F., Li, Y., Novak, I.L., Slepchenko, B.M.
PLoS Comput Biol. 2016 Dec 13;12(12):e1005236.
PUBMED:27959915      doi:10.1371/journal.pcbi.1005236
   VCell MathModels referenced in publication:
   user: boris,   model name: Hybrid_cell_polarity_public

On the importance of modelling the internal spatial dynamics of biological cells
Sayyid, F., Kalvala, S.
Biosystems. 2016 Jul;145:53-66.
PUBMED:27262415      doi:10.1016/j.biosystems.2016.05.012

Pancreatic Beta Cell G-Protein Coupled Receptors and Second Messenger Interactions: A Systems Biology Computational Analysis
Fridlyand, L. E., Philipson, L. H.
PLoS ONE. 2016;11(5):e0152869.
PUBMED:27138453      doi:10.1371/journal.pone.0152869
   VCell MathModels referenced in publication:
   user: Fridlyand,   model name: Messengers interaction

Paradoxical signaling regulates structural plasticity in dendritic spines
Rangamani, P., Levy, MG, Khan, S., Oster, G.
Proc Natl Acad Sci USA. 2016;113(36):E5298-307.
PUBMED:27551076      doi:10.1073/pnas.1610391113
   VCell BioModels referenced in publication:
   user: prangamani,   model name: Spine Model Final Rangamani et al PNAS 2016

Phosphoinositide 5- and 3-phosphatase activities of a voltage-sensing phosphatase in living cells show identical voltage dependence
Keum, D., Kruse, M., Kim, D. I., Hille, B., Suh, B. C.
Proc Natl Acad Sci USA. 2016;113(26):E3686-95.
PUBMED:27222577      doi:10.1073/pnas.1606472113
   VCell BioModels referenced in publication:
   user: hillelab,   model name: KeumKruseKimHilleSuh_2016

Regulation of quantal currents determines synaptic strength at neuromuscular synapses in larval Drosophila
Powers, Andrew S., Grizzaffi, Jeffrey, Ribchester, Richard, Lnenicka, Gregory A.
Pflugers Arch. 2016 Nov;468(11-12):2031-2040.
PUBMED:27783155      doi:10.1007/s00424-016-1893-7
   VCell BioModels referenced in publication:
   user: gregl,   model name: minepsp

Simultaneous quantification of actin monomer and filament dynamics with modelling assisted analysis of photoactivation
Kapustina, M., Read, T. A., Vitriol, E. A.
J Cell Sci. 2016 Dec 15;129(24):4633-4643
PUBMED:27831495      doi:10.1242/jcs.194670
   VCell BioModels referenced in publication:
   user: marynka,   model name: GF-actin FDAP
   user: marynka,   model name: Axon_FDAP

loading