biomodel-174341395
Name: “Histamtine-RhoA- Model_Final3”
Saved: Mar 05, 2020
vcell identifier: biomodel-174341395
Owned by: “jzz002”
2020 CompCellBio Workshop
2020-08-05. The 2020 Computational Cell Biology Workshop was held as an online event Aug 3-5. Find videos of the key presentations here. Over 70 individuals participated overall; 16 individuals created models with VCell, COPASI and SpringSaLaD with help from CCAM team members in breakout rooms. A screen shot of one the opening day presentations serves in place of our traditional group photo this year.
Nicholson et al., 2020
Whole-Cell Photobleaching Reveals Time-Dependent Compartmentalization of Soluble Proteins by the Axon Initial Segment.
Nicholson, L., N. Gervasi, T. Falières, A. Leroy, D. Miremont, D. Zala, and C. Hanus.
Front Cell Neurosci. 2020 14:180.
PUBMED:32754013
doi:10.3389/fncel.2020.00180
VCell model of diffusion in axon initial segment
2020-07-10. A new publication analyzes fluorescence photobleaching experiments using VCell numerical simulations to explore mechanisms of for differentiating somatodendritic and axonal compartments. Visit our published models page for links to the paper.
VCell model of PLC/PKC signaling
2020-04-07. A new spatial model of the PLC/PKC pahtway created in VCell was used to explore chemotactic sensing in fibroblasts in a new publication by Nosbisch et al from the Haugh lab. Visit our published models page for links to the paper and the VCell model.
Nosbisch et al., 2020
Mechanistic Models of PLC/PKC Signaling Implicate Phosphatidic Acid as a Key Amplifier of Chemotactic Gradient Sensing.
Nosbisch, J.L., A. Rahman, M. Krithika, T.C. Elston, J.E. Bear, and J. M. Haugh
PLoS Comput. Biol. 2020. 16(4):e1007708
PUBMED:32255775
doi:10.1371/journal.pcbi.1007708
VCell BioModels referenced in publication:
user: jnosbis, model name: Nosbisch chemotaxis 2020
biomodel-172076998
Name: “Nobisch chemotaxis 2020”
Saved: Jan 30, 2019
vcell identifier: biomodel-172076998
Owned by: “jnosbis”
biomodel-169993006
Name: “Monkeyflower_pigmentation_v2”
Saved: Nov 13, 2019
vcell identifier: biomodel-169993006
Owned by: “colreeze”
Ding et al., 2020
Two MYB Proteins in a Self-Organizing Activator-Inhibitor System Produce Spotted Pigmentation Patterns.
Ding, B., E.L. Patterson, S.V. Holalu, J. Li, G.A. Johnson, L.E. Stanley, A.B. Greenlee, F. Peng, H.D. Bradshaw, M.L. Blinov, B.K. Blackman, and Y.-W. Yuan
Current Biology. 30:802-814.e8
PUBMED:32155414
doi:10.1016/j.cub.2019.12.067
VCell BioModels referenced in publication:
user: colreeze, model name: Monkeyflower_pigmentation_v2
New VCell model of pattern formation system
2020-03-09. A new VCell model is used to explore how MYB proteins form an activator-inhibitor system that defines the spot pattern in mokeyflower petals. Visit our published models page for links to the paper and the VCell model.