Computational Cell Biology workshop

2024-08-02T14:25:01+00:00 August 2nd, 2024|CCAM Events, News|

2024-07-22-24. VCell  and COPASI teams run 25th Annual Workshop on Computational Cell Biology. Nine students (one could not attend due to flights being cancelled) from Arkansas,  Connecticut, New York, Ohio, Texas and  Viginia worked with instructors for 3 days, developing their computational models. Thanks to NIH for the funding!

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VCell at HARMONY 2024

2024-04-15T21:52:42+00:00 April 10th, 2024|CCAM Events, News|

2024-04-10. Michael Blinov and Ion Moraru presented VCell tutorial at HARMONY 2024 at University College London. Other topics discussed include interoperability of multiple standards like SBML, SED-ML and COMBINE archive supported by VCell.

25th Annual Comp Cell Bio workshop

2024-03-11T17:25:54+00:00 February 29th, 2024|CCAM Events, News|

VCell, COPASI and SpringSalad were taught and used for projects at the  25th Annual Computational Cell Biology (CCB) workshop that took place online February 26-28th.  The invited talks were given by Yulia Timofeeva (University of Warwick), James P Sluka (Indiana University) and Kevin Janes (University of Virginia). Sixteen participants were selected to work with VCell and COPASI instructors on their projects, and eight gave presentations on their projects at the Modeling Symposium.

Special Interest Group on Biophysical Modeling of the Cell

2024-03-14T01:13:54+00:00 December 8th, 2023|CCAM Events, News|

Michael Blinov and Margaret Johnson from John Hopkins University were hosting the Special Interest Subgroup session on Biophysical Modeling of the Cell at Cell Bio 2023 – an ASCB/EMBO (https://www.ascb.org/cellbio2023/) meeting in Boston, MA, December 2-6. The speakers include Elizabeth Read (UCI), Margaret Johnson (JHU), Jason Haugh (NCSU),  Graham Johnson (Allen Institute), and Ben O’Shaughnessy (Columbia U).

Summer Research Projects

2018-02-26T20:29:05+00:00 July 1st, 2017|CCAM Events, News, VCell Posts|

7-1-2017.  CCAM welcomes several undergraduates and a graduate rotation student who are working on projects related to VCell this summer . Undergraduate students include Keeyan Ghoreshi, Anvin Thomas, Natalie de la Garrique and Shahan Kamal from UConn Storrs and Kevin Gaffney from the University of Oklahoma. Joe Masison is a new MD/PhD student from University of Maryland. Keeyan is working on the infrastructure for Sloppy Modeling projects, Shahan is modeling pathways using high-throuput data, Natalie […]