K+ and pH homeostasis in plant cells is controlled by a synchronized K+ /H+ antiport at the plasma and vacuolar membrane.
Li, K., Grauschopf, C., Hedrich, R., Dreyer, I. & Konrad, K.R.
New Phytologist. 2024 Feb;241(4):1525-1542.
PUBMED:38017688
doi:10.1111/nph.19436
VCell BioModels referenced in the publication
user: idreyer
biomodel name: Li_et_al_2024_NewPhytol_Guard_Cell_Homeostats
2024-02-12. Ingo Dreyer (U Talca, Chile) and Kai Konrad (U Wuerzburg, Germany) used VCell to design and simulate a model explaining the properties of transporter networks and the coupling of transport across the PM and VM. They demonstrated fundamental principles of coupled ion transport at membrane sandwiches to control H+ /K+ homeostasis and points to transceptor-like Ca2+ /H+ -based ion signaling in plant cells.
Kunkun Li, Christina Grauschopf, Rainer Hedrich, Ingo Dreyer, Kai R Konrad (2024). […]
Name: “Li_et_al_2024_NewPhytol_Guard_Cell_Homeostats”
Saved: Mar 18, 2024
vcell identifier: biomodel-270051643
Owned by: “idreyer”
Michael Blinov and Margaret Johnson from John Hopkins University were hosting the Special Interest Subgroup session on Biophysical Modeling of the Cell at Cell Bio 2023 – an ASCB/EMBO (https://www.ascb.org/cellbio2023/) meeting in Boston, MA, December 2-6. The speakers include Elizabeth Read (UCI), Margaret Johnson (JHU), Jason Haugh (NCSU), Graham Johnson (Allen Institute), and Ben O’Shaughnessy (Columbia U).
Name: “cdh11-pdgfr-erk-feedback-v2”
Saved: Aug 21, 2023
vcell identifier: biomodel-259696124
Owned by: “zeynepkaragoz”
VCell was highlighted at the 22nd International Conference on Systems Biology (ICSB) that took place in Hartford October 8-12, 2023. The meeting was organized by CCAM faculty and co-chaired by Pedro Mendes and Ion Moraru. VCell team presented two tutorials (basic modeling by Ann Cowan and advanced features by Michael Blinov) and a poster.
2023-09-22. VCell collaborator Aurélie Carlier from Maastricht University published a manuscript where a computational model in VCell was used to represent the experimentally proven interactions between cadherin-11 and the two PDGFRs. The authors demonstrated the existence of a crosstalk between β-catenin (downstream to cadherin-11) and an ERK inhibitor protein (e.g. DUSP1).
Karagöz, Z., Passanha, F. R., Robeerst, L., van Griensven, M., LaPointe, V. L., & Carlier, A. (2023). Computational evidence for multi-layer crosstalk between the cadherin-11 and […]
Computational evidence for multi-layer crosstalk between the cadherin-11 and PDGFR pathways.
Karagöz, Z., Passanha, F. R., Robeerst, L., van Griensven, M., LaPointe, V. L. S., Carlier, A.
Sci Rep 13, 15804 2023.
PUBMED:37737289
doi: 10.1038/s41598-023-42624-x
VCell BioModels referenced in the publication
user: ra_mb_jb_jmh
biomodel name: cdh11-pdgfr-erk-feedback-v2
Name: “Figure S5”
Saved: Sep 10, 2023
vcell identifier: biomodel-260473891
Owned by: “ra_mb_jb_jmh”
Name: “Figure S4”
Saved: Sep 10, 2023
vcell identifier: biomodel-260473574
Owned by: “ra_mb_jb_jmh”
